PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G243500.8.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 230aa    MW: 25741.1 Da    PI: 4.2499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G243500.8.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.7e-05155198755
                         HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + RR ri ++++ LrellP +     +    a ++  ++++Ik Lq
  Prupe.8G243500.8.p 155 LHAKTRRMRIAERLDALRELLPIS-----TEGGQAFVVDDVIDHIKFLQ 198
                         55699*****************97.....34445666666666666666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.89148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-8151206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-5151204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-5157202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MEGQSSLTDP MQLVPLDFCG DAAIDVSQAT GDDPSQQVIM AAEGTAYQTD DLFSPWWTEK  60
PKPSLDSLNY VEFQAESSTF LPKDRSEDIL ESIPLSVSGI DDVGGVSEFQ REVLYSSLRN  120
ACGSKLTDFS MDMDEWKVRC LRPVNDELVN AQHQLHAKTR RMRIAERLDA LRELLPISTE  180
GGQAFVVDDV IDHIKFLQLQ IKDLCRSRLG GETITEPIIF REVYIIHLC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008355451.11e-79PREDICTED: transcription factor bHLH7-like
RefseqXP_008368858.11e-79PREDICTED: transcription factor bHLH7
RefseqXP_008368859.11e-79PREDICTED: transcription factor bHLH7
TrEMBLW9QKQ95e-47W9QKQ9_9R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.14e-14LJRHL1-like 1